Biomathematics workshop and summer school

IMPA, February, 4 – 14 , 2003

 

The Workshop

Mathematics is having an ever more significant impact in the physical and biological sciences. This is leading to the fall of feudal boundaries between scientific disciplines and the resurgence of interest in the modern as well as the classical techniques of applied mathematics.
The purpose of this two-week workshop is two-fold: On one side it is intended to inspire students and practitioners in the biological sciences to incorporate advanced mathematical techniques in their approach to science. On the other side, it will try to expose research mathematicians from different fields to relevant as well as difficult problems arising from the biological sciences.

The basic format of the workshop, which will take place from Tuesday, Feb 4th till Friday, Feb 14th, will be as follows: Morning (10AM-12 noon) and afternoon (2PM-3PM) contributed presentations. Mini-courses by leading experts in biomathematics: Greg Huber (Boston), Martin Nowak (Harvard), Marcelo Magnasco (Rockefeller and ICTP). Ample time for discussion during the lunch breaks. It will draw upon the reservoir of students and researchers that are present at IMPA during the Summer Session, as well as the cooperation from other institutions in the Rio area, such as LNCC and Instituto de Biofisica (UFRJ) to cite a few. The applied topics that will be covered, include, but are not limited to: quasi-species and universal grammar, evolution of cooperation and fairness, virus dynamics, medical and microscopy imaging, chemotaxy, cell dynamics, biological modeling.

Attendance is open to the members of the scientific, technological, and academic community, and no registration process will take place. The workshop is included in the Millennium Initiative IM-AGIMB, whose sponsorship is gratefully acknowledged.

For further information please contact:

zubelli@impa.br, bevi@lncc.br, jair@impa.br

 

 

Minicourses 

 

Date

Speaker

Title

January 7

Fabio Chalub

(Vienna)

Introducao aos Modelos Matemáticos para Quimiotaxia

January  9

Fabio Chalub

 (Vienna)

Minicurso: Introducao aos Modelos Matemáticos para Quimiotaxia. 

January 14

Jair Koiller

 (FGV & LNCC)

Movimento Flagelar via Mecanica Geométrica

January 16

Jair Koiller

(FGV &LNCC)

Movimento Flagelar via Mecanica Geométrica

January 21

Fabio Chalub

(Vienna)

Minicurso: Introducao aos Modelos Matemáticos para Quimiotaxia.

January 23

Raúl A. Feijoo

Um modelo computacional para o sistema cardiovascular humano

January 28

Larry Liebovitch (F.A.U.)

Using Fractals to Understand the Kinetics of Ion Channel Proteins

January 30

Larry Liebovitch (F.A.U.)

The Networks of How Genes Regulate Other Genes

February 4  
(3:30 PM)

 Greg Huber

Soft geometry: the mathematical bases of cellular structures. Part 1. 

February 5  
(3:30 PM)

 Greg Huber

Soft geometry: the mathematical bases of cellular structures. Part 2. 

February 6  
(3:30 PM)

 Greg Huber

Soft geometry: the mathematical bases of cellular structures. Part 3. 

February 7  
(3:30 PM)

 Greg Huber

Soft geometry: the mathematical bases of cellular structures. Part 4. 

February 10 
(3:30 PM)

Martin Nowak

From quasispecies to universal grammar.

February 11  
(3:30 PM)

Martin Nowak

Evolution of cooperation and fairness.

February 11  
(5:00 PM)

Marcelo Magnasco

The dynamical basis of the auditory function. Part 1. 

February 13 
(3:30 PM)

F. Michor

Mathematical models of cancer initiation.

February 13 
(5:00 PM)

Marcelo Magnasco

The dynamical basis of the auditory function. Part 2. 

February 14 
(3:30 PM)

Martin Nowak

Virus dynamics.    (handout)

February 18 
(5:00 PM)

Marcelo Magnasco

The dynamical basis of the auditory function. Part 3. 

February 20 
(5:00 PM)

Marcelo Magnasco

The dynamical basis of the auditory function. Part 4. 

 

Program

First Week

Tue – Feb. 4 Wed – Feb. 5 Thu – Feb. 6 Fri – Feb. 7
10:00  – 11:00 AM  
Invited Presentations 
Room 228
A bioengenharia tecidual na medicina regenerativa. 
Antonio Carlos Campos  Carvalho (IBCCF-UFRJ)
Aplicações da Microscopia Analitica em Biologia 
Marcos  Farina  (Anatomia-UFRJ)
Modelling Biological systems with delay differential equations. 
Coraci Malta, (IF-USP)
Modelos de cadeias tróficas. 
Michel Iskin da Silveira Costa (LNCC)
11:00 AM – Noon  
Invited Presentations 
Room 228
FREE Genomic research activities at the bioinformatics laboratory- LABINFO-LNCC. 
Ana Teresa Ribeiro Vasconcelos (LNCC)
Modelagem e dinâmica molecular  aplicada a proteínas e membranas. 
Pedro Geraldo Pascutti (IBCCF-UFRJ)
Numerical Solutions for Medical Applications in Electrical Impedance 
Tomography. 
Joyce S. Bevilacqua  (SENAC-SP)
12:00-2:00 PM  
Lunch
       
2:00 PM-3:00 PM  
Invited Presentations 
Room 236 
Dinâmica não-linear de filmes líquidos de interesse biológico.  
Paulo M. Bisch  
(IBCCF-UFRJ)
ATTENTION: 
Lecture  transfered to Feb. 13th. 
Medidas de forma e textura no diagnóstico de nódulos 
pulmonares. 
Paulo Cezar Pinto de Carvalho (IMPA)
Modelagem da Mecânica Respiratória 
Walter Zin (IBCCF-UFRJ)
3:30 PM-5:00 PM  
Minicourses  
Audit. 1. 
 Soft geometry: the mathematical bases of cellular structures 
Greg Huber
Soft geometry: the mathematical bases of cellular structures 
Greg Huber
Soft geometry: the mathematical bases of cellular structures 
Greg Huber
 Soft geometry: the mathematical bases of cellular structures 
Greg Huber

Second Week

Mon – Feb. 10 Tue – Feb. 11 Wed – Feb. 12 Thu – Feb. 13 Fri – Feb. 14
10:00-11:00 AM  
Invited Presentations 
Room 228 
Representacao fractal de membranas confinadas 
Luiz Bevilacqua (LNCC)
Threshold conditions for infection persistence in complex host-vectors interactions. 
Eduardo Massad (FMUSP)
FREE DAY Movimento Biológico.

Jair Koiller  
(FGV & LNCC)

Movimento Flagelar e o Motor Rotatório 

Gerusa A. de Araújo (LNCC)

11:00 AM – Noon  
Invited Presentations 
Room 228 
Experimental Models of Epilepsy, Models What? 
Esper Cavalheiro  (UNIFESP)
Orientation and direction of modules in Cebus visual cortex determined by electrophysiological imaging: experimental and modeling constraints. (jt  with A.C. Melo Diogo): 
Ricardo Gattass (UFRJ)
FREE DAY Global Stability of Steady Solutions for a Model in Virus Dynamics.

Hermano Frid Neto (IMPA)

Crescimento aletório sobre uma estrutura celular e aspectos competitivos.

Leandro Pimentel (IMPA)

12:00-2:00 PM  
Lunch 
     FREE DAY    
2:00-3:00 PM 
Invited  Presentations 
Room 236
Mathematical challenges in biomedical imaging. 
Jorge P. Zubelli  
(IMPA)
Quando Modelos Comportamentais Determinísticos Encontram Observações 
Empíricas: Métodos de Calibração Bayesianos 
Claudio Struchiner  (FIOCRUZ)
 FREE DAY Métodos Matemáticos no Estudo de Redes de Reações Bioquímicas.

Fernando de M C Vieira (IBCCF-UFRJ)

 O Impacto da Biologia Molecular na Pesquisa da Fisiologia Cardio-Vascular.

E. Krieger  
(USP) 

3:30-5:00 PM 
Minicourses  
Aud. 1
From quasispecies to universal grammar. 
Martin Nowak
Evolution of cooperation and fairness.

Martin Nowak

 FREE DAY Mathematical models of cancer initiation.

Franziska Michor

Virus dynamics.

Martin Nowak

5:00-6:30 PM 
Minicourses  
Room 228 
  The dynamical basis of the auditory function. Part 1.  
Marcelo Magnasco
 FREE DAY The dynamical basis of the auditory function. Part 2.  
Marcelo Magnasco
 

Abstracts

Participants

Adan Corcho Fernandez, IMPA
Alberto Cappurro Stanham, USP
Alexandre Fontes da Fonseca, USP
Ana Maria Soares Luz, IMPA
Ana Teresa Ribeiro Vasconcelos LNCC
Antonio Carlos Campos de Carvalho IBCCF-UFRJ
Bernardo Nunes, IMPA
Carlos Vasquez, IMPA
Claudia de Lello C. Guedes, USP-ICB-LEMB
Claudio Struchiner FIOCRUZ
Coraci P. Malta, IF-USP
Dayse Haime Pastore, IMPA
Eduardo Massad FMUSP
Esper Cavalheiro UNIFESP
Fábio Chalub (Univ. de Viena)
Fernando de M C Vieira: IBCCF-UFRJ
Franziska Michor, Harvard University
Gerusa A. de Araújo (LNCC)
Greg Huber, Univ. of Massachusetts
Hermano Frid Neto IMPA
Jacob Palis, IMPA
Jair Koiller LNCC
Jorge P. Zubelli IMPA
Joyce S. Bevilacqua, SENAC-SP
Larry S. Liebovitch, Florida Atlantic University
Leandro Pimentel, IMPA
Leonardo Paulo Maia, IFSC/USP
Luiz Bevilacqua LNCC
Luiz Bladismir Ruiz Leal, IMPA
Mahendra Panthee, IMPA
Marcelo Magnasco, ICTP
Marcos Farina, Anatomia-UFRJ
Martin Nowak, Institute for Advanced Studies
Michel Iskin da Silveira Costa LNCC
Paulo Bisch IBCCF-UFRJ
Paulo Cezar Pinto de Carvalho IMPA
Pedro Geraldo Pascutti IBCCF-UFRJ
Raul A. Feijó, LNCC
Ricardo Gattass UFRJ
Walter Zin IBCCF-UFRJ

 

Organizers

L. Bevilacqua (LNCC) 
Jair Koiller(LNCC&FGV) 
W. Zin (IBCCF) 
Jorge P. Zubelli (IMPA)